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CanVAS Hayward2016 · Founder
Cosmic medallion portrait of PFZ38B03_PFZ38B03, a Golden Retriever
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the CanVAS Founder atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

PFZ38B03_PFZ38B03

PFZ38B03_PFZ38B03 is a Golden Retriever from the Hayward2016 research cohort. One of 18,477 dogs in the atlas.

See PFZ38B03_PFZ38B03 in the atlas
About PFZ38B03_PFZ38B03

PFZ38B03_PFZ38B03 sits near the center of the Golden Retriever cluster - genetically very typical for the breed.

  • Predicted large by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Standard leg length. No chondrodysplasia retrogene variant.
  • Smooth coat. No wire-furnishings variant at RSPO2.
PFZ38B03_PFZ38B03's nearest neighbors

The five dogs in the atlas whose genomes sit closest to PFZ38B03_PFZ38B03's. Click any of them to keep exploring.

  1. GRLS_grls09ZIN1OO Golden Retriever 26.71
  2. PFZ23B02_PFZ23B02 Golden Retriever 26.92
  3. GRLS_grlsEBWSTBVV Golden Retriever 26.96
  4. GRLS_grls9BIH3NYY Golden Retriever 27.15
  5. GRLS_grlsMNTW6TNN Golden Retriever 27.34
PFZ38B03_PFZ38B03's breed

PFZ38B03_PFZ38B03 sits firmly in the Golden Retriever cluster.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Golden Retriever 100%
Source

From the CanVAS (Hayward2016 cohort) . Breed-page reference: Golden Retriever.

Genotype at the 15 morphology loci

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 C/A
HMGA2 C/T
SMAD2 G/G
LCORL G/G
STC2 A/A
ADAMTS17 G/A
Leg length
FGF4·CFA18 C/C
FGF4·CFA12 C/C
Coat
RSPO2 C/C
FGF5 C/C
KRT71 C/C
MC1R T/T
Ear set
MSRB3 A/A
Skull shape
BMP3 C/T
SMOC2 A/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 7.034
y 11.281
z 8.168
PCA-256 distance from breed centroid
27.49
Outlier percentile in breed
11
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which PFZ38B03_PFZ38B03 scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC244 z = -2.50
  • chr9:27,289,940 loading 0.0354
  • chr25:21,796,415 loading 0.0335
  • chr20:38,277,512 loading -0.0333
PC142 z = 2.38
  • chr23:22,412,099 loading 0.0339
  • chr12:15,112,297 loading -0.0336
  • chr12:4,421,359 loading 0.0318
PC139 z = -2.07
  • chr11:59,916,847 loading 0.0380
  • chr1:13,688,590 loading -0.0336
  • chr9:44,269,754 loading 0.0311
Ancestry reconstruction error: 0.55
Back to the Atlas →