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GRLS Hero · Founder
Cosmic medallion portrait of GRLS_grls9GSIT1NN, a Golden Retriever
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the CanVAS Founder atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

GRLS_grls9GSIT1NN

GRLS_grls9GSIT1NN is a Golden Retriever from the GRLS research cohort. One of 18,477 dogs in the atlas.

See GRLS_grls9GSIT1NN in the atlas
About GRLS_grls9GSIT1NN

GRLS_grls9GSIT1NN is a strong genetic outlier within the Golden Retriever cluster - among the most distinctive examples of their breed.

  • Predicted medium by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Standard leg length. No chondrodysplasia retrogene variant.
  • Wire-coat furnishings - the eyebrow + beard variant at RSPO2.
GRLS_grls9GSIT1NN's nearest neighbors

The five dogs in the atlas whose genomes sit closest to GRLS_grls9GSIT1NN's. Click any of them to keep exploring.

  1. GRLS_grlsK9NCFGFF Golden Retriever 17.74
  2. GRLS_grlsCH06411 Golden Retriever 18.23
  3. GRLS_grlsKSLZ3V77 Golden Retriever 19.39
  4. GRLS_grlsR4TIP1EE Golden Retriever 20.04
  5. GRLS_grlsL236FZEE Golden Retriever 20.86
GRLS_grls9GSIT1NN's breed

GRLS_grls9GSIT1NN sits in the Golden Retriever cluster, with genome overlap to Labrador Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Golden Retriever 75%
  2. Labrador Retriever 25%
Source

From the Golden Retriever Lifetime Study . Breed-page reference: Golden Retriever.

Genotype at the 15 morphology loci

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 C/A
HMGA2 C/C
SMAD2 G/G
LCORL G/G
STC2 C/A
ADAMTS17 G/G
Leg length
FGF4·CFA18 C/C
FGF4·CFA12 C/C
Coat
RSPO2 T/T
FGF5 T/C
KRT71 C/C
MC1R T/C
Ear set
MSRB3 A/A
Skull shape
BMP3 C/T
SMOC2 A/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 5.360
y 11.388
z 8.030
PCA-256 distance from breed centroid
44.66
Outlier percentile in breed
90
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which GRLS_grls9GSIT1NN scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC214 z = -3.90
  • chr22:26,809,841 loading 0.0329
  • chr13:7,517,248 loading -0.0323
  • chr26:11,829,785 loading 0.0322
PC105 z = -3.82
  • chr9:10,719,447 loading 0.0424
  • chr34:1,972,619 loading -0.0401
  • chr34:1,432,211 loading -0.0400
PC176 z = 3.77
  • chr13:1,243,516 loading 0.0372
  • chr13:4,612,002 loading -0.0358
  • chr13:2,021,999 loading -0.0342
Ancestry reconstruction error: 0.72
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