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GRLS Hero · Founder
Genome medallion
About this medallion

This medallion is built from this dog's genome. The outer ring is its breed composition, a corrected ancestry decomposition, colored to match its star in the atlas. The inner gauges are the traits we predict. If an owner claims the page, their real photo can take its place.

GRLS_grlsGD157RGG

GRLS_grlsGD157RGG is a Golden Retriever from the GRLS research cohort. One of 18,477 dogs in the atlas.

See GRLS_grlsGD157RGG in the atlas
About GRLS_grlsGD157RGG

GRLS_grlsGD157RGG is a strong genetic outlier within the Golden Retriever cluster - among the most distinctive examples of their breed.

  • Predicted large by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Standard leg length. No chondrodysplasia retrogene variant.
  • Carrier of the RSPO2 wire-coat variant (single copy).
GRLS_grlsGD157RGG's nearest neighbors

The five dogs in the atlas whose genetic profiles sit closest to GRLS_grlsGD157RGG's. Click any of them to keep exploring.

  1. GRLS_grls41067500 19.59
  2. GRLS_grlsMGDDQF00 20.09
  3. Oldies_grls4b233ceb 28.39
  4. GRLS_grls0PXYZ6BB 29.36
  5. GRLS_grlsTO87VV 30.52
GRLS_grlsGD157RGG's breed

GRLS_grlsGD157RGG sits in the Golden Retriever cluster, with genome overlap to Labrador Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation.

  1. Golden Retriever 77%
  2. Labrador Retriever 23%
Source

From the Golden Retriever Lifetime Study . Breed-page reference: Golden Retriever.

Genotype at the 15 morphology loci

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 C/A
HMGA2 C/T
SMAD2 G/G
LCORL G/G
STC2 C/C
ADAMTS17 G/G
Leg length
FGF4·CFA18 C/C
FGF4·CFA12 C/C
Coat
RSPO2 C/T
FGF5 T/T
KRT71 C/C
MC1R C/C
Ear set
MSRB3 A/A
Skull shape
BMP3 T/T
SMOC2 G/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 5.100
y 10.537
z 7.527
PCA-256 distance from breed centroid
48.31
Outlier percentile in breed
97
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which GRLS_grlsGD157RGG scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC43 z = 5.16
  • chr28:11,007,373 loading 0.0365
  • chr28:5,497,677 loading 0.0343
  • chr7:43,226,466 loading 0.0325
PC19 z = -4.88
  • chr36:5,342,283 loading 0.0327
  • chr3:69,391,244 loading 0.0300
  • chr25:17,826,837 loading -0.0278
PC175 z = -3.33
  • chr4:78,342,208 loading 0.0332
  • chr20:38,715,188 loading 0.0330
  • chr20:38,805,558 loading 0.0328
Ancestry reconstruction error: 0.76