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CanVAS Hayward2016 · Founder
Cosmic medallion portrait of PFZ24B03_PFZ24B03, a Golden Retriever
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the CanVAS Founder atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

PFZ24B03_PFZ24B03

PFZ24B03_PFZ24B03 is a Golden Retriever from the Hayward2016 research cohort. One of 18,477 dogs in the atlas.

See PFZ24B03_PFZ24B03 in the atlas
About PFZ24B03_PFZ24B03

PFZ24B03_PFZ24B03 sits near the center of the Golden Retriever cluster - genetically very typical for the breed.

  • Predicted giant by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Standard leg length. No chondrodysplasia retrogene variant.
  • Carrier of the RSPO2 wire-coat variant (single copy).
PFZ24B03_PFZ24B03's nearest neighbors

The five dogs in the atlas whose genomes sit closest to PFZ24B03_PFZ24B03's. Click any of them to keep exploring.

  1. Oldies_grlsb5d66ae9 Golden Retriever 26.68
  2. GRLS_grlsEZHMQWW Golden Retriever 26.68
  3. GRLS_grlsI46Y0RZZ Golden Retriever 28.12
  4. GRLS_grls9NWXF322 Golden Retriever 28.64
  5. GRLS_grls8SZ0PLUU Golden Retriever 28.81
PFZ24B03_PFZ24B03's breed

PFZ24B03_PFZ24B03 sits in the Golden Retriever cluster, with genome overlap to Labrador Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Golden Retriever 77%
  2. Labrador Retriever 24%
Source

From the CanVAS (Hayward2016 cohort) . Breed-page reference: Golden Retriever.

Genotype at the 15 morphology loci

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 C/C
HMGA2 T/T
SMAD2 G/G
LCORL G/G
STC2 A/A
ADAMTS17 A/A
Leg length
FGF4·CFA18 C/C
FGF4·CFA12 C/C
Coat
RSPO2 C/T
FGF5 T/T
KRT71 C/C
MC1R T/T
Ear set
MSRB3 A/A
Skull shape
BMP3 T/T
SMOC2 G/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 7.331
y 11.281
z 8.167
PCA-256 distance from breed centroid
28.30
Outlier percentile in breed
16
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which PFZ24B03_PFZ24B03 scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC116 z = 2.75
  • chr21:8,227,069 loading 0.0376
  • chr16:47,900,123 loading 0.0333
  • chr1:24,270,460 loading 0.0312
PC43 z = -2.67
  • chr28:11,007,373 loading 0.0365
  • chr28:5,497,677 loading 0.0343
  • chr7:43,226,466 loading 0.0325
PC175 z = 2.48
  • chr4:78,342,208 loading 0.0332
  • chr20:38,715,188 loading 0.0330
  • chr20:38,805,558 loading 0.0328
Ancestry reconstruction error: 0.55
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