PFZ39F04_PFZ39F04

PFZ39F04_PFZ39F04 sits well inside the Golden Retriever cluster - a fairly typical example.

• Predicted small by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
• Standard leg length. No chondrodysplasia retrogene variant.
• Carrier of the RSPO2 wire-coat variant (single copy).

The five dogs in the atlas whose genomes sit closest to PFZ39F04_PFZ39F04's. Click any of them to keep exploring.

1. PFZ37A09_PFZ37A09 Golden Retriever 37.18
2. GRLS_grlsQB8LEM77 Golden Retriever 37.25
3. GRLS_grls8T32TPNN Golden Retriever 37.40
4. Oldies_grls5302662a Golden Retriever 37.45
5. GRLS_grlsH3YQYR00 Golden Retriever 37.45

PFZ39F04_PFZ39F04 sits in the Golden Retriever cluster, with genome overlap to Labrador Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

1. Golden Retriever 79%
2. Labrador Retriever 21%

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.