PFZ39G05_PFZ39G05

PFZ39G05_PFZ39G05 sits at the edge of the Golden Retriever cluster but still well within it.

• Predicted giant by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
• Carries one copy of the FGF4 chondrodysplasia retrogene.
• Carrier of the RSPO2 wire-coat variant (single copy).

The five dogs in the atlas whose genomes sit closest to PFZ39G05_PFZ39G05's. Click any of them to keep exploring.

1. PFZ24E03_PFZ24E03 Golden Retriever 29.50
2. PFZ23E01_PFZ23E01 Golden Retriever 30.79
3. GRLS_grls6PQ77AKK Golden Retriever 31.50
4. Oldies_grls2e1693f3 Golden Retriever 31.60
5. Oldies_grls767408f1 Golden Retriever 31.63

PFZ39G05_PFZ39G05 sits in the American Cocker Spaniel cluster, with genome overlap to Golden Retriever, and Labrador Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

1. American Cocker Spaniel 43%
2. Golden Retriever 41%
3. Labrador Retriever 16%

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.