PILOT_grls18F2T1OO

PILOT_grls18F2T1OO sits well inside the Golden Retriever cluster - a fairly typical example.

• Predicted large by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
• Standard leg length. No chondrodysplasia retrogene variant.
• Wire-coat furnishings - the eyebrow + beard variant at RSPO2.

The five dogs in the atlas whose genomes sit closest to PILOT_grls18F2T1OO's. Click any of them to keep exploring.

1. GRLS_grls16Y39PGG Golden Retriever 32.48
2. GRLS_grlsYVZRBDQQ Golden Retriever 33.72
3. GRLS_grlsFC1D8UPP Golden Retriever 33.84
4. GRLS_grls52EPLTHH Golden Retriever 34.04
5. GRLS_grlsKTJLCH99 Golden Retriever 34.18

PILOT_grls18F2T1OO sits in the Golden Retriever cluster, with genome overlap to Labrador Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

1. Golden Retriever 78%
2. Labrador Retriever 22%

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.