PILOT_grlsXRMCGIKK

PILOT_grlsXRMCGIKK sits well inside the Golden Retriever cluster - a fairly typical example.

• Predicted large by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
• Standard leg length. No chondrodysplasia retrogene variant.
• Carrier of the RSPO2 wire-coat variant (single copy).

The five dogs in the atlas whose genomes sit closest to PILOT_grlsXRMCGIKK's. Click any of them to keep exploring.

1. GRLS_grls1FFQVPRR Golden Retriever 29.58
2. GRLS_grlsJTVXY4PP Golden Retriever 34.28
3. GRLS_grlsO3TR4RHH Golden Retriever 34.74
4. GRLS_grlsJZ2T2EKK Golden Retriever 34.91
5. GRLS_grls23J9GHOO Golden Retriever 35.19

PILOT_grlsXRMCGIKK sits in the Golden Retriever cluster, with genome overlap to Labrador Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

1. Golden Retriever 82%
2. Labrador Retriever 18%

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.