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CanVAS Shannon · Founder
Cosmic medallion portrait of PFZ31H09_PFZ31H09, a Golden Retriever
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the CanVAS Founder atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

PFZ31H09_PFZ31H09

PFZ31H09_PFZ31H09 is a Golden Retriever from the Shannon research cohort. One of 18,477 dogs in the atlas.

See PFZ31H09_PFZ31H09 in the atlas
About PFZ31H09_PFZ31H09

PFZ31H09_PFZ31H09 is a notable Golden Retriever - distinctive within the breed.

  • Predicted large by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Standard leg length. No chondrodysplasia retrogene variant.
  • Smooth coat. No wire-furnishings variant at RSPO2.
PFZ31H09_PFZ31H09's nearest neighbors

The five dogs in the atlas whose genomes sit closest to PFZ31H09_PFZ31H09's. Click any of them to keep exploring.

  1. PFZ31D11_PFZ31D11 Golden Retriever 27.07
  2. PFZ31G09_PFZ31G09 Golden Retriever 31.69
  3. GRLS_grls52LTK855 Golden Retriever 35.98
  4. GRLS_grlsKRQ2F4FF Golden Retriever 35.98
  5. GRLS_grlsR2FVJBB Golden Retriever 36.79
PFZ31H09_PFZ31H09's breed

PFZ31H09_PFZ31H09 sits in the Golden Retriever cluster, with genome overlap to Labrador Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Golden Retriever 75%
  2. Labrador Retriever 25%
Source

From the CanVAS (Shannon cohort) . Breed-page reference: Golden Retriever.

Genotype at the 15 morphology loci

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 C/C
HMGA2 C/T
SMAD2 A/A
LCORL G/G
STC2 C/A
ADAMTS17 G/A
Leg length
FGF4·CFA18 C/C
FGF4·CFA12 C/C
Coat
RSPO2 C/C
FGF5 T/C
KRT71 C/C
MC1R T/C
Ear set
MSRB3 A/A
Skull shape
BMP3 C/T
SMOC2 G/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 9.174
y 10.499
z 9.240
PCA-256 distance from breed centroid
42.97
Outlier percentile in breed
86
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which PFZ31H09_PFZ31H09 scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC53 z = -5.09
  • chr1:72,254,803 loading 0.0346
  • chr1:70,825,780 loading 0.0344
  • chr14:9,177,180 loading 0.0335
PC49 z = 4.89
  • chr22:1,808,281 loading 0.0358
  • chr1:70,511,608 loading 0.0354
  • chr22:2,157,682 loading 0.0341
PC121 z = 3.26
  • chr1:99,506,167 loading 0.0408
  • chr15:22,270,589 loading -0.0399
  • chr15:22,844,988 loading -0.0387
Ancestry reconstruction error: 0.65
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